[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 86 items for (author: cronin & n)

EMDB-19079:
Cryo-EM structure of bacterial RNA polymerase-sigma54 initial transcribing complex - 5nt pre-translocated complex
Method: single particle / : Gao F, Zhang X

EMDB-19080:
Cryo-EM structure of bacterial RNA polymerase-sigma54 initial transcribing complex - 5nt post-translocated complex
Method: single particle / : Gao F, Zhang X

EMDB-19081:
Cryo-EM structure of bacterial RNA polymerase-sigma54 initial transcribing complex - 6nt complex
Method: single particle / : Gao F, Zhang X

EMDB-19082:
Cryo-EM structure of bacterial RNA polymerase-sigma54 initial transcribing complex - 7nt complex
Method: single particle / : Gao F, Zhang X

EMDB-19083:
Cryo-EM structure of bacterial RNA polymerase-sigma54 initial transcribing complex - 8nt complex
Method: single particle / : Gao F, Zhang X

EMDB-19084:
Cryo-EM structure of bacterial RNA polymerase-sigma54 initial transcribing complex - 9nt complex
Method: single particle / : Gao F, Zhang X

PDB-8re4:
Cryo-EM structure of bacterial RNA polymerase-sigma54 initial transcribing complex - 5nt pre-translocated complex
Method: single particle / : Gao F, Zhang X

PDB-8rea:
Cryo-EM structure of bacterial RNA polymerase-sigma54 initial transcribing complex - 5nt post-translocated complex
Method: single particle / : Gao F, Zhang X

PDB-8reb:
Cryo-EM structure of bacterial RNA polymerase-sigma54 initial transcribing complex - 6nt complex
Method: single particle / : Gao F, Zhang X

PDB-8rec:
Cryo-EM structure of bacterial RNA polymerase-sigma54 initial transcribing complex - 7nt complex
Method: single particle / : Gao F, Zhang X

PDB-8red:
Cryo-EM structure of bacterial RNA polymerase-sigma54 initial transcribing complex - 8nt complex
Method: single particle / : Gao F, Zhang X

PDB-8ree:
Cryo-EM structure of bacterial RNA polymerase-sigma54 initial transcribing complex - 9nt complex
Method: single particle / : Gao F, Zhang X

EMDB-17169:
Cryo-EM structure of the SARS-CoV-2 Spike bound to TMEM106B
Method: single particle / : CHEREPANOV P

EMDB-17170:
Local refinement of the SARS-CoV-2 Spike RBD bound to TMEM106B
Method: single particle / : CHEREPANOV P

EMDB-16914:
Cryo-EM structure of the DnaD-NTD tetramer
Method: single particle / : Winterhalter C, Pelliciari S, Cronin N, Costa TRD, Murray H, Ilangovan A

PDB-8ojj:
Cryo-EM structure of the DnaD-NTD tetramer
Method: single particle / : Winterhalter C, Pelliciari S, Cronin N, Costa TRD, Murray H, Ilangovan A

EMDB-13663:
CryoEM structure of DnaD dimer from Bacillus subtilis
Method: single particle / : Winterhalter C, Pelliciari S, Cronin N, Costa TRD, Ilangovan I, Murray H

EMDB-13895:
CryoEM structure of the Smc5/6-holocomplex (composite structure)
Method: single particle / : Hallett ST, Oliver AW

PDB-7qcd:
CryoEM structure of the Smc5/6-holocomplex (composite structure)
Method: single particle / : Hallett ST, Oliver AW

EMDB-13893:
Cryo-EM structure of the Smc5/6 holo-complex; map for head-end of complex.
Method: single particle / : OLIVER AW, Hallett ST

EMDB-13894:
CryoEM structure of the Smc5/6 holocomplex; map for hinge and arm region.
Method: single particle / : OLIVER AW, Hallett ST

EMDB-14591:
CryoEM structure of SARS-CoV-2 spike monomer in complex with neutralising antibody P008_60
Method: single particle / : Rosa A, Pye VE, Cronin N, Cherepanov P

PDB-7zbu:
CryoEM structure of SARS-CoV-2 spike monomer in complex with neutralising antibody P008_60
Method: single particle / : Rosa A, Pye VE, Cronin N, Cherepanov P

EMDB-26676:
Three RBD-down state of SARS-CoV-2 D614G spike in complex with the SP1-77 neutralizing antibody Fab fragment
Method: single particle / : Zhang J, Luo S, Kreutzberger A, Kirchhausen T, Chen B, Haynes B, Alt F

EMDB-26677:
Three RBD-down state of SARS-CoV-2 D614G spike in complex with the SP1-77 neutralizing antibody Fab fragment (local refinement of the RBD and Fab variable domains)
Method: single particle / : Zhang J, Luo S, Kreutzberger A, Kirchhausen T, Chen B, Haynes B, Alt F

EMDB-26678:
An antibody from single human VH-rearranging mouse neutralizes all SARS-CoV-2 variants through BA.5 by inhibiting membrane fusion
Method: single particle / : Zhang J, Luo S, Kreutzberger A, Kirchhausen T, Chen B, Haynes B, Alt F

EMDB-27043:
Negative stain electron microscopy single particle reconstruction of monoclonal antibody SP1-77 Fab in complex with SARS-CoV2 2P spike
Method: single particle / : Edwards RJ, Mansouri K

EMDB-27044:
Negative stain electron microscopy single particle reconstruction of monoclonal antibody VHH7-7-53 Fab in complex with SARS-CoV2 2P spike
Method: single particle / : Edwards RJ, Mansouri K

EMDB-27046:
Negative stain electron microscopy single particle reconstruction of monoclonal antibody VHH7-5-82 Fab in complex with SARS-CoV2 2P spike
Method: single particle / : Edwards RJ, Mansouri K

PDB-7upw:
Three RBD-down state of SARS-CoV-2 D614G spike in complex with the SP1-77 neutralizing antibody Fab fragment
Method: single particle / : Zhang J, Luo S, Kreutzberger A, Kirchhausen T, Chen B, Haynes B, Alt F

PDB-7upx:
Three RBD-down state of SARS-CoV-2 D614G spike in complex with the SP1-77 neutralizing antibody Fab fragment (local refinement of the RBD and Fab variable domains)
Method: single particle / : Zhang J, Luo S, Kreutzberger A, Kirchhausen T, Chen B, Haynes B, Alt F

PDB-7upy:
An antibody from single human VH-rearranging mouse neutralizes all SARS-CoV-2 variants through BA.5 by inhibiting membrane fusion
Method: single particle / : Zhang J, Luo S, Kreutzberger A, Kirchhausen T, Chen B, Haynes B, Alt F

EMDB-25105:
Structure of SARS-CoV S protein in complex with Receptor Binding Domain antibody DH1047
Method: single particle / : Gobeil S, Acharya P

PDB-7sg4:
Structure of SARS-CoV S protein in complex with Receptor Binding Domain antibody DH1047
Method: single particle / : Gobeil S, Acharya P

EMDB-13075:
Structure of the STLV intasome:B56 complex bound to the strand-transfer inhibitor XZ450
Method: single particle / : Barski MS, Ballandras-Colas A, Cronin NB, Pye VE, Cherepanov P, Maertens GN

EMDB-13076:
STLV-1 intasome:B56 in complex with the strand-transfer inhibitor raltegravir
Method: single particle / : Barski MS, Ballandras-Colas A, Cronin NB, Pye VE, Cherepanov P, Maertens GN

EMDB-13077:
Structure of the STLV intasome:B56 complex bound to the strand-transfer inhibitor bictegravir
Method: single particle / : Barski MS, Ballandras-Colas A, Cronin NB, Pye VE, Cherepanov P, Maertens GN

PDB-7ouf:
Structure of the STLV intasome:B56 complex bound to the strand-transfer inhibitor XZ450
Method: single particle / : Barski MS, Ballandras-Colas A, Cronin NB, Pye VE, Cherepanov P, Maertens GN

PDB-7oug:
STLV-1 intasome:B56 in complex with the strand-transfer inhibitor raltegravir
Method: single particle / : Barski MS, Ballandras-Colas A, Cronin NB, Pye VE, Cherepanov P, Maertens GN

PDB-7ouh:
Structure of the STLV intasome:B56 complex bound to the strand-transfer inhibitor bictegravir
Method: single particle / : Barski MS, Ballandras-Colas A, Cronin NB, Pye VE, Cherepanov P, Maertens GN

EMDB-23400:
SARS-CoV-2 Spike Protein Trimer bound to DH1043 fab
Method: single particle / : Gobeil S, Acharya P

PDB-7ljr:
SARS-CoV-2 Spike Protein Trimer bound to DH1043 fab
Method: single particle / : Gobeil S, Acharya P

EMDB-23246:
CryoEM map of SARS-CoV-2 S protein in complex with Receptor Binding Domain antibody DH1041
Method: single particle / : Manne K, Acharya P

PDB-7laa:
Structure of SARS-CoV-2 S protein in complex with Receptor Binding Domain antibody DH1041
Method: single particle / : Manne K, Acharya P

EMDB-23248:
CryoEM map of SARS-CoV-2 S protein in complex with N-terminal domain antibody DH1052
Method: single particle / : Manne K, Acharya P

PDB-7lab:
Structure of SARS-CoV-2 S protein in complex with N-terminal domain antibody DH1052
Method: single particle / : Manne K, Acharya P

EMDB-23277:
CryoEM map of SARS-CoV-2 S protein in complex with N-terminal domain antibody DH1050.1
Method: single particle / : Manne K, Acharya P

EMDB-23279:
CryoEM map of SARS-CoV-2 S protein in complex with Receptor Binding Domain antibody DH1047
Method: single particle / : Manne K, Acharya P

PDB-7lcn:
Structure of SARS-CoV-2 S protein in complex with N-terminal domain antibody DH1050.1
Method: single particle / : Manne K, Acharya P

PDB-7ld1:
Structure of SARS-CoV-2 S protein in complex with Receptor Binding Domain antibody DH1047
Method: single particle / : Manne K, Acharya P

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more